Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008867.1 Corchorus capsularis cultivar CVL-1 contig08888, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20149

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4754--4808
27
2.0
27
100
0
110
10
27
21
40
1.87
4761--4818
27
2.1
27
84
6
73
15
29
18
36
1.92
7400--7433
2
17.0
2
100
0
68
50
0
0
50
1.00
14401--14450
17
3.1
17
68
26
54
26
4
20
50
1.66
16877--16925
10
4.7
10
80
16
55
59
2
0
38
1.09
16877--16926
25
2.0
25
96
0
91
60
2
0
38
1.09

Tables:   1

The End!