Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008868.1 Corchorus capsularis cultivar CVL-1 contig08889, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10945

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3578--3640
19
3.2
18
78
12
63
30
4
22
42
1.74
5808--5879
32
2.2
32
85
9
94
27
20
20
30
1.98
6032--6117
28
2.8
31
70
13
79
33
22
16
27
1.95
9970--10010
17
2.6
15
82
14
55
80
0
17
2
0.82
9980--10017
6
6.5
6
93
6
69
84
0
15
0
0.63
9981--10017
11
3.3
11
92
7
65
83
0
16
0
0.64
9980--10017
17
2.2
18
95
4
69
84
0
15
0
0.63
10032--10112
20
4.1
20
100
0
162
0
50
4
44
1.23

Tables:   1

The End!