Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008869.1 Corchorus capsularis cultivar CVL-1 contig08890, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40448

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3393--3446
27
2.0
27
100
0
108
51
3
14
29
1.60
3390--3438
14
3.6
14
72
5
55
53
4
14
28
1.59
3952--4405
170
2.7
170
97
0
863
48
5
14
30
1.66
6288--6326
2
19.0
2
94
5
69
48
2
0
48
1.15
9054--9086
6
5.5
6
96
0
57
63
3
15
18
1.43
10792--10840
15
3.3
15
88
0
71
46
28
10
14
1.77
16822--16943
58
2.1
58
96
1
226
36
14
16
31
1.89
24127--24158
12
2.7
12
100
0
64
15
18
43
21
1.87
40301--40445
78
1.9
77
91
4
240
49
0
13
37
1.42

Tables:   1

The End!