Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008870.1 Corchorus capsularis cultivar CVL-1 contig08891, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25978

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6929--7018
16
5.8
16
86
3
121
8
13
36
41
1.76
6929--7032
31
3.3
31
83
5
120
8
15
35
40
1.78
7023--7067
6
7.7
6
82
5
56
0
22
46
31
1.52
7011--7064
23
2.3
23
87
0
72
1
22
48
27
1.61
7765--7806
20
2.1
20
82
8
50
28
2
4
64
1.26
7806--7838
10
3.1
11
86
8
50
0
21
54
24
1.45
7832--7876
16
2.8
16
93
0
72
6
15
37
40
1.74
8848--8936
44
2.0
44
95
0
160
38
3
25
32
1.73
11595--11634
18
2.2
18
86
4
53
45
5
20
30
1.72
14397--14430
17
2.0
17
100
0
68
23
5
23
47
1.73
21141--21179
12
3.2
12
81
0
51
66
0
10
23
1.22
21669--21726
28
2.2
26
87
6
80
32
12
17
37
1.86

Tables:   1

The End!