Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008877.1 Corchorus capsularis cultivar CVL-1 contig08898, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6118

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--42
17
2.2
17
90
4
60
53
0
0
46
1.00
2212--2238
2
13.5
2
100
0
54
51
0
0
48
1.00
2288--2330
3
15.0
3
90
4
63
72
0
27
0
0.85
2481--2521
21
2.0
21
90
0
64
51
0
19
29
1.47
2719--2762
21
2.2
20
83
4
52
56
4
6
31
1.46

Tables:   1

The End!