Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008879.1 Corchorus capsularis cultivar CVL-1 contig08900, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7962

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
538--565
13
2.2
13
100
0
56
39
0
7
53
1.28
583--644
24
2.4
26
78
15
74
33
32
0
33
1.58
699--762
33
1.9
33
84
6
85
42
14
14
29
1.84
1974--2003
12
2.5
12
94
0
51
56
6
6
30
1.51
2821--2853
12
2.8
12
90
4
50
9
15
6
69
1.34

Tables:   1

The End!