Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008885.1 Corchorus capsularis cultivar CVL-1 contig08906, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10681

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
864--897
16
2.2
16
89
5
52
29
2
8
58
1.43
1866--1940
29
2.6
28
75
19
75
70
4
10
14
1.29
3573--3625
21
2.6
21
84
3
63
9
32
30
28
1.88
4775--4870
38
2.6
37
82
9
122
59
11
14
14
1.61
5091--5138
24
2.0
24
100
0
96
41
4
12
41
1.62

Tables:   1

The End!