Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008893.1 Corchorus capsularis cultivar CVL-1 contig08914, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41576

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
360--439
33
2.4
33
89
0
115
21
40
28
10
1.85
382--455
33
2.2
33
87
0
112
18
40
29
10
1.85
4955--4991
19
1.9
19
89
10
58
40
2
51
5
1.39
8251--8599
176
2.0
176
99
0
689
30
9
7
52
1.62
9392--9429
11
3.5
11
85
10
51
57
2
0
39
1.12
18366--18402
15
2.5
15
83
16
51
62
5
32
0
1.18
18944--18970
11
2.5
11
100
0
54
0
0
22
77
0.76
32114--32187
27
2.7
28
93
2
123
35
17
20
27
1.95
39981--40020
20
2.0
20
90
0
62
15
0
7
77
0.98

Tables:   1

The End!