Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008894.1 Corchorus capsularis cultivar CVL-1 contig08915, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59395

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--27
2
13.5
2
100
0
54
51
0
0
48
1.00
2246--2288
16
2.6
17
92
3
70
0
20
53
25
1.46
2277--2322
16
2.8
17
84
15
62
4
15
41
39
1.67
2246--2326
6
12.7
6
74
25
60
2
18
46
32
1.62
13651--13690
18
2.2
18
86
8
55
27
17
7
47
1.74
19752--19961
69
2.9
70
78
13
251
45
13
14
26
1.83
22185--22223
16
2.7
15
85
14
55
23
0
2
74
0.94
33405--33436
3
10.7
3
93
0
55
3
65
31
0
1.08
37010--37209
60
3.3
60
85
2
240
39
16
16
28
1.90
37253--37366
58
2.0
57
84
5
149
31
18
14
35
1.91
37520--37660
60
2.3
61
86
6
198
39
16
16
28
1.90
39344--40094
376
2.0
375
96
0
1369
42
12
14
29
1.83
43252--43281
14
2.1
15
93
6
53
3
6
0
90
0.56
46340--46376
14
2.8
13
88
11
58
48
0
5
45
1.25
59056--59101
20
2.2
21
92
3
76
41
19
4
34
1.71

Tables:   1

The End!