Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008899.1 Corchorus capsularis cultivar CVL-1 contig08920, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6449

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
178--469
146
2.0
147
94
0
514
25
13
16
44
1.84
2014--2057
21
2.0
21
83
12
54
38
22
9
29
1.85
3010--3092
2
42.0
2
92
2
141
1
0
49
49
1.08
3357--3408
23
2.2
23
82
6
59
55
1
3
38
1.29
5626--5682
26
2.2
26
80
0
69
17
14
21
47
1.82

Tables:   1

The End!