Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000089.1 Corchorus capsularis cultivar CVL-1 contig00089, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1286

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--275
69
4.0
69
85
2
353
25
29
18
27
1.98
479--548
10
6.2
11
83
12
72
81
0
15
2
0.81
491--545
10
5.3
10
86
6
74
83
0
16
0
0.64
479--548
12
6.2
12
79
19
71
81
0
15
2
0.81
491--548
22
2.7
21
84
7
80
82
0
17
0
0.66
740--814
28
2.7
27
85
4
96
17
12
24
46
1.81
1237--1281
23
2.0
23
100
0
90
17
17
22
42
1.89

Tables:   1

The End!