Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008900.1 Corchorus capsularis cultivar CVL-1 contig08921, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28337

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2951--3057
32
3.3
32
83
11
105
18
26
28
27
1.98
3017--3303
113
2.5
114
92
1
470
22
24
22
29
1.99
5232--5297
31
2.2
31
86
8
91
9
28
39
22
1.85
7363--7388
13
2.0
13
100
0
52
38
15
7
38
1.76
13675--13749
33
2.3
33
88
4
107
28
8
18
45
1.78
14786--14992
33
6.3
33
89
2
263
41
15
7
34
1.76
14786--14992
66
3.1
66
88
1
290
41
15
7
34
1.76

Tables:   1

The End!