Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008912.1 Corchorus capsularis cultivar CVL-1 contig08933, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43224

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4509--4533
12
2.1
12
100
0
50
0
8
32
60
1.26
14717--14770
17
3.0
17
77
15
63
33
5
14
46
1.68
21452--21495
21
2.2
20
87
4
61
34
6
2
56
1.38
21904--21930
4
6.8
4
100
0
54
0
22
0
77
0.76
37154--37188
18
2.0
18
88
5
54
77
0
22
0
0.78
37419--37507
43
2.1
43
100
0
178
48
15
15
20
1.81
40422--40471
23
2.2
24
92
7
86
38
4
8
50
1.51
40976--41006
2
16.0
2
93
6
55
51
0
0
48
1.00
40873--41091
115
1.9
115
99
0
429
46
11
9
32
1.71

Tables:   1

The End!