Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008913.1 Corchorus capsularis cultivar CVL-1 contig08934, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7671

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
330--366
13
2.6
15
83
16
60
51
0
0
48
1.00
485--547
12
4.9
12
73
21
56
30
0
14
55
1.39
476--552
40
1.9
41
97
2
147
31
0
11
57
1.35
494--565
28
2.7
25
79
12
81
30
0
11
58
1.33
534--579
14
3.2
14
87
3
65
32
0
10
56
1.34
494--576
15
5.9
15
71
23
65
31
0
12
56
1.36
4406--4456
26
1.9
26
84
11
68
58
5
0
35
1.22
6248--6302
26
2.1
26
96
0
101
52
0
9
38
1.33
6309--6346
18
2.2
17
90
4
58
44
0
2
52
1.14
6314--6359
18
2.4
18
82
7
56
47
2
4
45
1.34

Tables:   1

The End!