Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008915.1 Corchorus capsularis cultivar CVL-1 contig08936, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19116

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
242--308
30
2.3
30
84
2
82
25
10
26
37
1.88
10696--10721
1
26.0
1
100
0
52
0
0
0
100
0.00
10931--10976
24
1.9
24
90
0
74
26
19
28
26
1.99
11111--11167
30
1.9
30
92
0
96
31
21
22
24
1.98
15002--15053
2
26.0
2
96
0
77
50
5
0
44
1.26
15922--15964
8
6.0
7
79
15
52
39
0
0
60
0.97

Tables:   1

The End!