Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008917.1 Corchorus capsularis cultivar CVL-1 contig08938, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69524

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21244--21276
4
8.2
4
100
0
66
75
0
24
0
0.80
22658--22693
2
18.5
2
88
5
56
55
0
0
44
0.99
23434--23484
24
2.1
25
92
3
86
68
3
19
7
1.30
28530--28733
113
1.8
113
93
0
354
24
27
21
25
1.99
33121--33150
13
2.2
14
94
5
53
66
13
6
13
1.43
65880--65909
11
2.7
11
100
0
60
60
26
0
13
1.34
66041--66081
21
1.9
21
85
5
55
53
7
19
19
1.68

Tables:   1

The End!