Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008919.1 Corchorus capsularis cultivar CVL-1 contig08940, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8095

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2939--2988
21
2.4
21
93
0
82
10
40
14
36
1.79
7139--7300
4
39.5
4
68
14
53
64
2
6
26
1.31
7187--7239
12
4.5
12
78
2
63
67
1
7
22
1.25
7161--7270
24
4.5
24
75
12
73
62
2
8
26
1.37
7349--7413
17
4.2
17
81
16
72
58
3
7
30
1.42
7361--7413
27
2.0
27
85
7
72
60
3
7
28
1.41
7457--7499
22
2.0
21
90
4
68
62
0
11
25
1.29

Tables:   1

The End!