Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008925.1 Corchorus capsularis cultivar CVL-1 contig08946, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12356

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1033--1108
38
2.0
38
92
5
127
28
22
13
35
1.92
2385--2487
54
1.9
54
91
0
170
36
12
20
30
1.90
2395--2528
54
2.4
54
81
7
144
36
15
17
30
1.91
2508--2564
29
2.0
29
92
0
96
36
17
21
24
1.94
2572--2668
33
2.9
33
92
0
158
27
17
20
34
1.95
2708--2775
32
2.1
33
86
2
93
48
4
27
19
1.68
5328--5388
25
2.7
23
79
16
74
31
14
6
47
1.70
5694--5723
6
5.0
6
91
0
51
53
13
0
33
1.40
6663--6688
10
2.6
10
100
0
52
23
7
19
50
1.73

Tables:   1

The End!