Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008928.1 Corchorus capsularis cultivar CVL-1 contig08949, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19127

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
920--1269
69
5.0
69
91
1
556
25
19
18
37
1.94
1971--2011
21
2.0
21
85
4
57
29
17
17
36
1.92
5402--5613
108
2.0
105
91
2
343
45
8
11
34
1.71
6541--6630
32
2.8
32
91
1
146
27
16
15
40
1.89
16247--16275
2
14.5
2
100
0
58
51
0
0
48
1.00
16910--16934
2
12.5
2
100
0
50
48
0
0
52
1.00

Tables:   1

The End!