Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008929.1 Corchorus capsularis cultivar CVL-1 contig08950, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26353

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
780--831
15
3.5
14
82
10
59
84
3
9
1
0.82
787--832
16
3.0
15
87
12
67
82
2
13
2
0.85
3048--3101
16
3.4
16
76
19
67
9
22
37
31
1.86
4794--5055
104
2.5
103
86
3
348
24
10
24
40
1.87
11284--11422
31
4.5
31
71
15
110
36
18
18
25
1.94
11462--11580
60
2.0
60
88
3
177
31
17
16
34
1.93
14157--14187
15
2.1
15
100
0
62
61
12
6
19
1.53
20106--20166
16
3.9
15
77
10
59
18
8
36
37
1.80
20122--20173
16
3.2
16
78
10
70
13
9
38
38
1.77
20097--20183
32
2.7
32
92
0
138
13
9
37
39
1.77
20336--20411
16
4.8
16
81
0
89
6
13
28
51
1.65
20329--20410
32
2.6
32
92
0
137
6
12
30
51
1.63
22795--22880
41
2.1
41
97
0
163
29
9
12
48
1.72
23962--24006
15
2.9
16
80
6
56
13
15
31
40
1.86
26170--26225
2
28.5
2
90
3
87
46
1
0
51
1.11

Tables:   1

The End!