Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008931.1 Corchorus capsularis cultivar CVL-1 contig08952, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25170

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2245
324
7.0
323
85
4
2943
35
13
16
35
1.87
1--2245
647
3.5
643
87
4
3186
35
13
16
35
1.87
2320--3048
317
2.3
318
83
8
861
34
13
15
35
1.87
1487--3048
854
1.8
846
84
5
1903
35
13
15
35
1.87
5805--5835
2
15.5
2
100
0
62
51
0
0
48
1.00
18270--18294
13
1.9
13
100
0
50
24
8
16
52
1.70
18526--18561
19
1.9
18
88
5
54
5
2
19
72
1.17

Tables:   1

The End!