Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008933.1 Corchorus capsularis cultivar CVL-1 contig08954, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1506

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
99--251
36
4.4
36
66
27
89
41
5
22
30
1.76
122--524
44
9.3
43
68
19
168
45
4
21
27
1.72
200--307
56
1.9
56
86
3
155
46
6
21
25
1.75
374--516
8
18.1
8
76
13
82
44
4
23
27
1.71
361--498
30
4.5
30
74
19
97
44
4
22
28
1.72

Tables:   1

The End!