Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008938.1 Corchorus capsularis cultivar CVL-1 contig08959, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15951

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2411--2452
20
2.1
20
90
0
66
54
7
19
19
1.66
3623--3681
23
2.6
23
83
5
75
61
13
8
16
1.56
3649--3696
23
2.3
22
82
13
57
60
16
2
20
1.46
5597--5628
11
2.9
11
90
0
55
37
0
18
43
1.51
5607--5644
19
2.1
18
90
5
58
44
2
21
31
1.66
6598--6631
7
4.9
7
88
0
50
11
2
14
70
1.27
12595--12637
11
3.9
11
90
0
68
46
6
4
41
1.51
12591--12637
22
2.1
22
96
0
85
46
6
4
42
1.48
13908--13972
30
2.2
30
94
0
112
24
38
30
6
1.80

Tables:   1

The End!