Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008940.1 Corchorus capsularis cultivar CVL-1 contig08961, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22007

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5446--5478
3
10.7
3
93
6
57
33
0
0
66
0.92
6862--6894
12
2.5
13
85
14
50
75
0
24
0
0.80
6866--6894
12
2.3
13
94
5
51
75
0
24
0
0.80
8241--8445
40
5.1
40
83
10
249
30
15
16
37
1.90
8246--8445
82
2.5
81
87
7
273
30
15
16
38
1.89
20829--20867
1
39.0
1
94
0
60
0
5
0
94
0.29

Tables:   1

The End!