Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008944.1 Corchorus capsularis cultivar CVL-1 contig08965, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1257

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
768--912
24
6.0
24
67
18
77
28
21
3
46
1.67
822--876
8
6.9
8
78
0
56
29
20
3
47
1.67
822--876
16
3.4
16
84
0
74
29
20
3
47
1.67
891--930
21
1.9
21
84
0
53
27
17
0
55
1.43
1007--1249
8
33.2
8
66
21
90
27
22
4
45
1.71
1069--1193
6
18.0
6
70
22
61
32
22
3
42
1.69
1107--1187
41
1.9
42
87
9
121
32
24
3
39
1.73
1052--1256
14
14.3
14
70
18
95
28
23
3
43
1.71
1163--1256
38
2.6
36
83
6
134
26
24
4
44
1.72
1204--1256
22
2.4
22
96
0
97
26
22
1
49
1.60

Tables:   1

The End!