Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008945.1 Corchorus capsularis cultivar CVL-1 contig08966, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44093

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
336--380
23
2.0
23
82
8
56
31
8
13
46
1.74
4221--4275
27
2.0
27
89
6
85
12
20
5
61
1.50
16310--16406
23
4.0
23
72
13
88
41
17
5
36
1.72
16847--16875
14
2.1
14
93
6
51
75
13
6
3
1.13
21115--21205
30
3.1
29
82
6
121
32
27
23
16
1.96
20560--21338
410
1.9
405
81
5
940
27
22
21
28
1.99
43656--43719
30
2.1
30
97
0
119
26
26
25
21
2.00
43531--43908
189
2.0
189
100
0
756
28
22
19
30
1.98
43845--43923
30
2.6
30
95
0
140
29
27
24
18
1.98

Tables:   1

The End!