Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008947.1 Corchorus capsularis cultivar CVL-1 contig08968, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40889

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
410--439
2
15.0
2
100
0
60
50
0
0
50
1.00
1522--1590
30
2.3
29
80
2
84
30
11
26
31
1.91
1844--1872
3
9.7
3
100
0
58
31
0
0
68
0.89
8021--8184
83
2.0
78
91
5
265
47
4
10
36
1.60
11763--11848
33
2.4
35
84
9
104
23
20
16
39
1.92
27441--27478
11
3.5
11
85
10
51
57
2
0
39
1.12
31340--31382
23
2.0
21
81
9
50
44
16
16
23
1.86
34111--34186
24
3.2
24
83
5
100
22
27
22
27
1.99
34312--34385
32
2.2
32
85
4
94
27
16
21
35
1.94
34325--34414
32
2.8
32
86
0
108
24
20
18
36
1.95
36808--36883
28
2.8
27
88
4
125
21
19
39
19
1.93

Tables:   1

The End!