Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008949.1 Corchorus capsularis cultivar CVL-1 contig08970, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5485

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2486--2533
22
2.1
23
88
11
73
58
4
18
18
1.55
2517--2575
14
4.4
14
70
20
54
54
6
20
18
1.66
2455--2625
89
2.0
84
83
14
213
53
5
21
19
1.65
2494--2638
46
3.4
43
75
18
133
54
4
21
19
1.62
2726--2759
16
2.1
16
94
0
59
58
8
17
14
1.61
2772--2859
21
4.2
19
69
22
52
50
7
21
20
1.74
2909--2972
27
2.2
28
81
10
85
60
0
23
15
1.34
4452--4550
42
2.4
42
84
3
119
22
23
14
40
1.90

Tables:   1

The End!