Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008950.1 Corchorus capsularis cultivar CVL-1 contig08971, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13856

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1828--1870
21
2.0
21
100
0
86
67
0
23
9
1.19
2773--2851
36
2.2
36
95
0
140
50
12
10
26
1.72
2918--3035
33
3.5
33
84
4
130
48
11
20
20
1.79
2918--3025
11
9.6
11
80
7
101
48
11
20
20
1.80
3027--3272
36
7.0
36
81
5
306
42
9
21
26
1.84
3027--3277
105
2.4
105
88
1
360
42
9
21
25
1.84
3029--3272
70
3.5
71
87
3
334
41
9
22
26
1.84
3296--3401
36
2.9
36
90
5
153
48
6
17
27
1.72

Tables:   1

The End!