Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008957.1 Corchorus capsularis cultivar CVL-1 contig08978, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33189

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2577--2606
5
6.0
5
92
0
51
16
0
0
83
0.65
3622--3729
33
3.3
33
83
6
130
8
26
41
23
1.82
4400--4434
1
35.0
1
100
0
70
0
0
0
100
0.00
9682--9740
28
2.1
28
100
0
118
32
10
18
38
1.84
11459--11491
17
1.9
17
93
0
57
6
90
3
0
0.52
16903--16950
22
2.3
20
86
10
62
39
22
16
20
1.92
16870--16972
53
1.9
53
90
0
161
35
26
20
17
1.94
16922--17020
31
3.2
31
82
2
110
33
26
21
19
1.97
21177--21202
2
13.0
2
100
0
52
50
0
0
50
1.00
25934--26316
49
7.8
49
81
2
342
23
29
17
30
1.97
27319--27373
16
3.5
15
78
9
56
45
34
10
9
1.71
29275--29357
29
2.7
31
80
10
100
31
20
12
36
1.89
29901--29934
11
2.9
12
86
8
52
41
0
17
41
1.50

Tables:   1

The End!