Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008962.1 Corchorus capsularis cultivar CVL-1 contig08983, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41828

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1413--1454
3
14.0
3
100
0
84
66
0
33
0
0.92
2185--2227
20
2.2
20
95
0
77
53
4
0
41
1.21
2261--2337
33
2.3
33
84
4
93
12
37
37
11
1.81
9641--9791
74
2.1
73
92
1
248
37
9
31
21
1.85
26537--26575
17
2.2
19
86
9
55
30
20
2
46
1.64
36636--36687
27
1.9
27
81
14
63
59
0
7
32
1.26
36504--36789
144
1.9
149
88
4
429
51
2
9
37
1.48
37519--37614
47
2.0
47
100
0
192
27
14
16
41
1.87
40422--40474
25
2.2
25
89
3
81
28
16
11
43
1.83

Tables:   1

The End!