Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008968.1 Corchorus capsularis cultivar CVL-1 contig08989, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63758

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3675--3709
2
17.5
2
100
0
70
51
0
0
48
1.00
32964--33070
54
2.0
54
85
7
146
19
28
16
35
1.94
35897--35992
47
2.0
47
100
0
192
25
12
22
39
1.89
42195--42254
29
2.1
29
93
0
102
45
21
3
30
1.68
44129--44175
24
1.9
25
86
4
69
34
8
6
51
1.58
47763--47810
21
2.2
21
85
3
60
39
35
12
12
1.81
53169--53200
6
5.2
6
92
7
55
50
0
15
34
1.45
58621--58659
17
2.3
17
86
0
51
2
28
0
69
1.02
58654--58695
18
2.3
18
88
12
59
16
4
2
76
1.07
63710--63758
21
2.4
21
89
3
73
87
0
6
6
0.66
63709--63758
22
2.3
22
89
3
75
88
0
6
6
0.65
63703--63748
1
46.0
1
93
0
65
93
0
2
4
0.41

Tables:   1

The End!