Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008970.1 Corchorus capsularis cultivar CVL-1 contig08991, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33036

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6822--6853
2
16.0
2
100
0
64
50
0
0
50
1.00
7661--7685
2
12.5
2
100
0
50
52
0
0
48
1.00
9181--9456
110
2.5
109
92
5
439
38
11
1
48
1.50
14142--14171
14
2.2
13
94
5
51
83
0
0
16
0.65
22203--22240
18
2.2
17
90
4
58
60
36
0
2
1.11
28698--28735
19
2.0
20
89
5
60
23
10
15
50
1.75
29230--29304
26
3.0
24
76
7
71
44
2
6
46
1.43
32006--32077
29
2.6
29
82
6
87
43
5
27
23
1.76

Tables:   1

The End!