Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008973.1 Corchorus capsularis cultivar CVL-1 contig08994, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10154

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5028--5094
34
1.9
35
96
3
127
23
19
17
38
1.93
5984--6020
14
2.8
13
95
4
65
40
10
5
43
1.63
5972--6088
48
2.4
49
91
4
193
36
11
16
35
1.84
7787--8241
8
60.5
8
63
21
96
26
21
5
45
1.74
7788--7898
37
2.9
37
80
9
100
26
21
2
49
1.63
7867--7906
21
1.9
21
84
0
53
27
17
0
55
1.43
8045--8155
6
16.0
6
70
23
60
31
21
3
43
1.70
8028--8339
14
21.6
14
69
17
160
28
22
4
44
1.72
8046--8150
22
4.9
22
84
6
144
31
21
3
42
1.71
8031--8310
36
7.4
36
72
19
149
28
22
4
43
1.73
8166--8339
22
7.6
22
67
21
99
28
21
4
45
1.70
8112--8242
60
2.3
57
85
8
192
27
25
3
43
1.72
8175--8315
72
1.9
73
89
1
221
28
22
4
44
1.71
8175--8339
36
4.6
34
83
10
179
29
21
4
44
1.71
8407--8452
24
1.9
24
81
0
56
30
15
6
47
1.70

Tables:   1

The End!