Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008976.1 Corchorus capsularis cultivar CVL-1 contig08997, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18881

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2920--2949
1
30.0
1
100
0
60
100
0
0
0
0.00
7724--7777
19
2.7
21
85
8
76
44
24
3
27
1.70
8230--8305
30
2.5
31
85
6
93
42
6
7
43
1.60
8997--9067
30
2.4
30
90
0
106
40
4
40
14
1.65
10381--10627
123
2.0
123
98
0
476
40
17
22
20
1.92
11722--11754
1
33.0
1
100
0
66
100
0
0
0
0.00

Tables:   1

The End!