Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008982.1 Corchorus capsularis cultivar CVL-1 contig09003, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43722

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--73
2
36.0
2
100
0
144
0
50
0
50
1.00
5461--5502
20
2.1
21
86
8
61
28
7
7
57
1.52
7406--7456
21
2.3
22
80
6
59
25
25
39
9
1.86
11797--11845
24
2.0
24
96
0
89
30
20
24
24
1.98
13662--13705
20
2.2
21
88
8
65
29
6
6
56
1.51
14511--14869
157
2.3
156
80
7
381
35
20
15
29
1.93
19472--19530
29
2.0
30
86
3
84
38
37
6
16
1.76
19634--19670
15
2.5
15
95
0
65
54
2
8
35
1.44
26494--26569
38
2.0
37
84
2
98
31
14
23
30
1.94
25854--26681
427
1.9
427
85
0
1120
31
14
13
40
1.85
39525--39554
2
15.0
2
100
0
60
50
0
0
50
1.00
40813--40837
3
8.3
3
100
0
50
32
0
32
36
1.58

Tables:   1

The End!