Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008983.1 Corchorus capsularis cultivar CVL-1 contig09004, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7855

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
139--207
33
2.1
33
91
2
113
24
20
28
26
1.99
2481--2514
16
2.0
17
88
11
52
29
52
17
0
1.45
2557--2645
6
14.8
6
69
25
55
32
47
15
4
1.66
2561--2616
16
3.8
14
75
17
51
35
42
14
7
1.73
2591--2647
22
2.6
22
72
10
64
33
49
17
0
1.47
3388--3448
17
3.7
16
80
12
70
19
50
27
1
1.57
3438--3509
15
4.7
15
93
5
117
36
41
15
6
1.74
3438--3509
31
2.3
31
95
0
126
36
41
15
6
1.74
6350--6379
2
15.0
2
92
0
51
53
0
0
46
1.00

Tables:   1

The End!