Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008990.1 Corchorus capsularis cultivar CVL-1 contig09011, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21216

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1131--1187
30
1.9
30
88
0
87
31
21
14
33
1.92
3325--3365
2
20.5
2
94
0
73
46
2
0
51
1.14
4816--4852
2
18.5
2
100
0
74
51
0
0
48
1.00
7281--7313
17
1.9
17
93
0
57
60
0
18
21
1.36
9974--10095
22
5.6
22
70
1
75
31
13
10
44
1.77
10341--10511
22
7.8
22
70
8
116
33
14
10
40
1.80
9862--10912
378
2.8
377
94
2
1838
33
16
11
38
1.85
10719--11055
22
15.6
22
66
13
130
35
14
9
40
1.79
11252--11304
27
2.0
26
82
17
65
45
0
13
41
1.43

Tables:   1

The End!