Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008997.1 Corchorus capsularis cultivar CVL-1 contig09018, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31108

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
333--366
6
5.5
6
86
6
50
55
17
0
26
1.42
328--372
18
2.5
17
82
10
63
55
17
4
22
1.60
363--410
13
3.7
13
100
0
96
62
8
8
20
1.49
6966--7045
41
2.0
41
82
9
101
56
3
8
31
1.48
7437--7481
18
2.5
18
86
10
65
55
15
2
26
1.52
7437--7475
6
6.5
6
91
8
62
56
15
0
28
1.40
12731--12766
17
2.0
19
89
10
58
55
11
5
27
1.57
24122--24200
39
2.0
39
100
0
158
41
12
5
40
1.65
25389--25422
17
1.9
18
94
5
61
41
0
0
58
0.98

Tables:   1

The End!