Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008999.1 Corchorus capsularis cultivar CVL-1 contig09020, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10295

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3327--3560
45
5.2
45
89
1
346
32
18
21
26
1.97
4859--4907
24
2.1
24
88
7
75
0
24
0
75
0.80
5497--5540
14
3.2
14
90
3
63
2
22
0
75
0.92
6167--6222
13
4.2
13
76
17
53
35
12
7
44
1.70
6167--6222
27
2.1
26
86
3
76
35
12
7
44
1.70
9028--9176
22
7.3
20
74
15
119
22
20
6
51
1.70
9044--9122
35
2.2
37
90
6
135
21
20
6
51
1.69
9074--9176
44
2.3
44
88
3
145
21
18
6
53
1.67
9216--9273
15
3.5
15
71
24
53
17
25
1
55
1.52
9143--9273
36
3.7
36
85
10
169
16
25
3
54
1.59
9275--9336
26
2.4
26
83
2
81
25
17
6
50
1.70
9301--9383
32
2.5
33
81
13
107
22
19
4
53
1.64
9419--9536
40
2.9
41
82
8
143
21
20
6
51
1.70

Tables:   1

The End!