Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009022.1 Corchorus capsularis cultivar CVL-1 contig09043, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46694

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17044--17220
49
3.7
49
88
3
252
13
22
23
41
1.89
21216--21240
13
1.9
13
100
0
50
16
32
8
44
1.76
21583--21644
30
2.1
30
87
6
90
19
29
19
32
1.96
26407--26558
42
3.9
41
72
21
128
25
38
25
9
1.87
26441--26514
32
2.3
32
83
4
87
27
37
27
8
1.84
29370--29556
48
3.9
48
89
0
284
11
24
19
44
1.83
29537--29699
48
3.4
47
89
3
229
23
26
19
29
1.98
34135--34439
123
2.4
125
86
3
409
17
25
27
29
1.97
38464--38502
18
2.2
18
95
0
69
28
20
20
30
1.98

Tables:   1

The End!