Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009030.1 Corchorus capsularis cultivar CVL-1 contig09051, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24516

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1837--1898
32
1.9
32
93
0
106
22
12
14
50
1.77
2726--2841
58
2.0
59
91
1
189
22
6
19
51
1.68
4368--4401
13
2.6
13
95
0
59
50
0
0
50
1.00
4376--4408
17
1.9
17
93
0
57
45
3
0
51
1.16
5176--5203
2
14.0
2
100
0
56
50
0
0
50
1.00
6439--6574
68
2.0
68
94
0
236
26
6
10
56
1.57
8852--8877
13
2.0
13
100
0
52
30
30
7
30
1.85
11322--11374
21
2.5
21
90
0
79
52
26
3
16
1.61
14311--14339
2
15.0
2
92
7
51
51
0
0
48
1.00
14378--14440
29
2.2
29
85
0
81
34
22
7
34
1.83
15785--15836
22
2.3
23
80
12
63
50
9
11
28
1.70

Tables:   1

The End!