Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009036.1 Corchorus capsularis cultivar CVL-1 contig09057, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27125

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4457--4516
30
2.0
30
100
0
120
33
20
6
40
1.78
9548--9698
52
2.9
52
89
3
232
31
14
13
40
1.85
13917--13954
14
2.6
14
91
4
58
31
10
7
50
1.66
13857--13954
48
2.0
49
88
5
146
34
10
14
40
1.79
13937--14015
20
4.1
19
73
13
72
41
7
13
36
1.74
15658--15861
8
25.4
8
66
15
82
27
23
3
46
1.68
15949--16155
22
9.5
22
73
9
138
29
21
5
43
1.74
15989--16028
20
2.0
20
85
9
55
20
22
5
52
1.65
16032--16111
14
5.4
15
70
18
60
31
22
3
42
1.71
16040--16190
58
2.6
56
80
12
139
30
22
4
42
1.74
16105--16190
36
2.4
36
84
0
109
30
22
4
43
1.73
24333--24405
7
10.7
7
88
5
98
69
0
15
15
1.18

Tables:   1

The End!