Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009041.1 Corchorus capsularis cultivar CVL-1 contig09062, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35349

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1955--1991
15
2.6
14
87
8
56
21
0
2
75
0.92
1960--1991
15
2.2
15
94
5
57
25
0
0
75
0.81
2742--2770
15
1.9
15
100
0
58
13
27
31
27
1.94
13461--13639
70
2.5
71
80
2
200
40
10
21
27
1.86
13699--13789
40
2.3
40
98
0
173
49
12
12
26
1.75
13833--14072
74
3.2
71
88
8
324
46
8
21
23
1.78
13833--14072
39
6.5
35
90
7
313
46
8
21
23
1.78
20365--20410
23
2.0
23
83
8
58
15
30
0
54
1.41
21176--21209
16
2.1
16
100
0
68
70
0
11
17
1.16
31918--31987
31
2.2
32
89
2
106
25
31
22
20
1.98
31788--32182
195
2.0
193
90
1
612
29
20
21
28
1.98
32147--32213
32
2.1
31
91
2
107
19
31
22
26
1.98
31916--32330
226
1.8
226
91
2
690
28
20
21
30
1.98

Tables:   1

The End!