Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009042.1 Corchorus capsularis cultivar CVL-1 contig09063, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17274

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8400--8424
13
1.9
13
100
0
50
32
16
16
36
1.90
9017--9048
12
2.7
12
95
0
55
43
31
0
25
1.55
11322--11389
16
4.3
15
76
20
59
8
16
0
75
1.05
11346--11387
8
5.2
8
82
0
57
11
14
0
73
1.09
12045--12081
12
3.0
12
96
4
65
43
8
8
40
1.64
12072--12136
20
3.5
19
72
23
66
35
15
10
38
1.82
12072--12138
21
3.5
20
75
24
74
35
16
10
37
1.83
12046--12117
20
4.8
15
75
21
55
38
11
9
40
1.74
12060--12161
36
3.0
33
89
9
161
35
16
9
38
1.82
14285--14325
21
2.1
18
86
13
55
24
26
12
36
1.91

Tables:   1

The End!