Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009044.1 Corchorus capsularis cultivar CVL-1 contig09065, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3509

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
196--250
22
2.5
22
87
0
83
32
16
18
32
1.93
197--306
22
4.9
22
77
4
76
30
10
21
38
1.86
504--650
22
6.6
22
76
12
124
40
10
14
34
1.82
565--718
66
2.3
65
82
9
179
40
9
14
35
1.80
787--1190
22
18.7
22
71
13
193
38
9
15
35
1.81
3172--3211
22
1.9
22
85
10
57
55
2
12
30
1.50
3385--3422
2
19.0
2
100
0
76
50
0
0
50
1.00

Tables:   1

The End!