Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009054.1 Corchorus capsularis cultivar CVL-1 contig09075, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16231

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1213--1245
10
3.1
11
86
8
50
24
54
21
0
1.45
5235--5301
17
4.1
16
75
9
64
14
8
37
38
1.78
5248--5312
32
2.0
32
90
0
103
16
9
36
36
1.81
5481--5519
20
2.0
20
85
10
53
35
5
5
53
1.45
10073--10116
21
2.1
21
100
0
88
29
31
9
29
1.88
10583--10616
17
2.0
17
88
11
52
52
8
23
14
1.69
11842--11905
32
2.0
32
100
0
128
28
15
15
40
1.88
15498--15561
31
2.0
32
85
8
87
35
3
15
45
1.62

Tables:   1

The End!