Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009055.1 Corchorus capsularis cultivar CVL-1 contig09076, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27736

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4189--4250
28
2.2
28
88
0
88
17
9
27
45
1.80
7680--7767
31
2.8
31
70
13
74
31
3
25
39
1.72
8892--8918
2
13.5
2
100
0
54
51
0
0
48
1.00
10568--10603
5
6.8
5
87
12
54
77
2
0
19
0.88
18830--19983
390
2.9
389
85
7
1661
26
29
20
23
1.98
21205--21243
19
2.2
17
86
9
51
5
23
0
71
1.05
21411--21466
26
2.2
26
86
0
76
57
23
3
16
1.55
22793--22831
16
2.4
16
86
0
51
15
15
30
38
1.88

Tables:   1

The End!