Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009058.1 Corchorus capsularis cultivar CVL-1 contig09079, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17999

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1360--1412
26
2.1
27
82
10
67
52
1
39
5
1.36
3179--3214
19
1.9
18
88
5
54
41
5
22
30
1.76
13696--13923
124
1.8
127
83
6
313
39
14
6
39
1.71
15845--15992
76
1.9
76
91
2
244
38
3
16
41
1.66
16933--17097
31
5.5
31
69
16
148
32
21
20
26
1.98
16937--17097
60
2.7
60
95
0
286
32
21
20
25
1.97
16968--17068
29
3.4
29
70
20
82
30
21
20
26
1.98
17128--17326
31
6.6
30
74
13
176
25
19
20
35
1.95
17160--17322
60
2.7
59
89
3
254
24
19
20
36
1.95
17191--17291
29
3.4
29
73
10
105
24
18
20
35
1.95

Tables:   1

The End!