Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009063.1 Corchorus capsularis cultivar CVL-1 contig09084, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4890

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
294--381
33
2.7
33
81
0
95
28
9
21
40
1.84
325--389
33
2.0
33
90
0
103
26
9
20
44
1.81
419--509
33
2.8
32
82
8
105
34
8
16
40
1.79
431--520
30
2.9
30
79
11
92
33
8
16
41
1.80
4098--4887
154
5.1
154
91
2
1280
22
17
18
41
1.91
4098--4887
309
2.6
309
90
2
1302
22
17
18
41
1.91

Tables:   1

The End!